Shared Resources

Sequencer
Long-read sequencer for which we are optimizing new protocols for high accuracy detection of rare structural variants (SVs) - nicknamed Penelope (get it?).
Jeanmarie Mishler CNV Mechanisms
Michigan Data Interface
Software
A standardized framework for developing, installing and running HPC data analysis pipelines and interactive R Shiny visualization applications.
MDI
Genomics MDI Tools
Software
Shared MDI tools, modules, environments, and options for pipelines and apps that perform genomic data analysis
MDI
SVX MDI Tools
Software
MDI pipelines and apps for genome structural variant analysis by different library strategies
CNV Mechanisms MDI Wilson et al. 2023